Tau-Leaping Methods for Jump-Diffusion
Tau-leaping methods approximate jump processes by "leaping" over multiple potential jump events in a single time step. These methods are essential for efficiently simulating systems with jump-diffusion processes.
Tau-Leaping Methods
TauLeaping - Basic Tau-Leaping
StochasticDiffEq.TauLeaping
— TypeTauLeaping()
TauLeaping: Basic Tau-Leaping Method (Jump-Diffusion)
Basic tau-leaping method for approximating jump-diffusion processes by "leaping" over multiple potential jump events.
Method Properties
- Problem type: Jump-diffusion processes
- Approach: Approximate multiple jumps per time step
- Time stepping: Fixed tau approach
- Accuracy: Depends on tau selection
When to Use
- Jump-diffusion systems with many small jumps
- When exact jump simulation is computationally prohibitive
- Chemical reaction networks with fast reactions
- Population models with high birth-death rates
- Initial exploration of jump-diffusion problems
Algorithm Description
Approximates Poisson processes by assuming constant propensities over time interval tau, then sampling number of jumps from Poisson distribution.
Tau Selection
Critical parameter: tau should be small enough that jump rates don't change significantly over [t, t+tau].
References
- Gillespie, D.T., "Approximate accelerated stochastic simulation of chemically reacting systems"
CaoTauLeaping - Cao's Tau-Leaping
StochasticDiffEq.CaoTauLeaping
— TypeCaoTauLeaping()
CaoTauLeaping: Cao's Adaptive Tau-Leaping Method (Jump-Diffusion)
Advanced tau-leaping method with adaptive tau selection and improved error control.
Method Properties
- Problem type: Jump-diffusion processes
- Approach: Adaptive tau selection with error control
- Time stepping: Adaptive tau based on error estimates
- Accuracy: Superior to basic tau-leaping
When to Use
- Production jump-diffusion simulations requiring reliability
- When adaptive tau selection is needed
- Problems where basic TauLeaping gives poor accuracy
- Chemical reaction networks requiring precise control
Algorithm Features
- Adaptive tau selection based on error estimates
- Better stability and accuracy than basic tau-leaping
- Automatic step size control
- More sophisticated error estimation
Tau Selection
Automatically adjusts tau based on:
- Local error estimates
- Jump rate variations
- Solution stability requirements
References
- Cao, Y., Gillespie, D.T., Petzold, L.R., "Efficient step size selection for the tau-leaping method"
Understanding Jump-Diffusion Processes
Jump-diffusion processes combine:
- Continuous diffusion: Standard Brownian motion terms
- Jump processes: Discontinuous jumps at random times
General form:
dX = μ(X,t)dt + σ(X,t)dW + ∫ h(X-,z)Ñ(dt,dz)
Where:
- μ(X,t)dt: Drift term
- σ(X,t)dW: Diffusion term
- Ñ(dt,dz): Compensated random measure (jumps)
When to Use Tau-Leaping
Appropriate for:
- Systems with many small jumps
- When exact jump simulation is computationally prohibitive
- Chemical reaction networks
- Population models with birth-death processes
- Financial models with rare events
Not appropriate for:
- Systems dominated by large, infrequent jumps
- When exact jump timing is critical
- Small systems where exact methods are feasible
Method Characteristics
TauLeaping:
- Basic tau-leaping approximation
- Fixed tau approach
- Good for initial exploration
CaoTauLeaping:
- Adaptive tau selection
- More sophisticated error control
- Better for production simulations
Configuration
Tau-leaping methods require:
- Jump rate functions: λ(X,t) for each reaction/jump type
- Jump effects: How state changes with each jump
- Tau selection: Time step size strategy
# Basic setup
prob = JumpProblem(base_problem, aggregator, jumps...)
sol = solve(prob, TauLeaping())
# With adaptive tau
sol = solve(prob, CaoTauLeaping(), tau_tol=0.01)
Accuracy Considerations
Tau-leaping approximation quality depends on:
- Jump frequency vs. tau size
- State change magnitude per jump
- System stiffness
- Error tolerance requirements
Rule of thumb: Tau should be small enough that jump rates don't change significantly over [t, t+tau].
Alternative Approaches
If tau-leaping is inadequate:
- Exact methods: Gillespie algorithm for small systems
- Hybrid methods: Combine exact and approximate regions
- Moment closure: For statistical properties only
- Piecewise deterministic: For systems with rare jumps
Performance Tips
- Vectorize jump computations when possible
- Use sparse representations for large systems
- Tune tau carefully - too large gives poor accuracy, too small is inefficient
- Monitor jump frequencies to validate approximation
Integration with DifferentialEquations.jl
using DifferentialEquations, StochasticDiffEq
# Define base SDE
function drift!(du, u, p, t)
# Continuous drift
end
function diffusion!(du, u, p, t)
# Continuous diffusion
end
# Define jumps
jump1 = ConstantRateJump(rate1, affect1!)
jump2 = VariableRateJump(rate2, affect2!)
# Combine into jump-diffusion problem
sde_prob = SDEProblem(drift!, diffusion!, u0, tspan)
jump_prob = JumpProblem(sde_prob, Direct(), jump1, jump2)
# Solve with tau-leaping
sol = solve(jump_prob, TauLeaping())
References
- Gillespie, D.T., "Approximate accelerated stochastic simulation of chemically reacting systems"
- Cao, Y., Gillespie, D.T., Petzold, L.R., "Efficient step size selection for the tau-leaping method"