Edit on GitHub

StructuralIdentifiability.jl

StructuralIdentifiability.jl is a comprehensive toolbox for assessing identifiability parameters.

This documentation contains information about the functionality of the package as well as examples of use cases.

Installation

To install StructuralIdentifiability.jl, use the Julia package manager:

using Pkg
Pkg.add("StructuralIdentifiability")

Citation

@article{structidjl,
  author  = {Dong, R. and Goodbrake, C. and Harrington, H. and Pogudin G.},
  title   = {Differential elimination for dynamical models via projections with applications to structural identifiability},
  journal = {preprint},
  url     = {https://arxiv.org/abs/2111.00991},
  year    = {2021}
}

Feature Summary

StructuralIdentifiability.jl can assess local and global identifiability of ODE models. In addition to these straightforward identifiability queries on individual parameters, the package is able to distinguish between single- and multi-experiment identifiability.

Feature List

  • Local identifiability checks
  • Global identifiability checks
  • Assessment of identifiable functions of parameters

Contributing